BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G03SP1|AL430276
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1465 0.0
>3x_Contig1619
Length = 7770
Score = 1465 bits (735), Expect = 0.0
Identities = 752/761 (98%), Gaps = 2/761 (0%)
Strand = Plus / Minus
Query: 1 attcattcttttgaaaatatctattagaattaatacaccccgcggctcctcccttcgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2619 attcattcttttgaaaatatctattagaattaatacaccccgcggctcctcccttcgggg 2560
Query: 61 ggagtccgcggggaaagatctaaatttatcttccccccgcggcatcacccaaccctaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2559 ggagtccgcggggaaagatctaaatttatcttccccccgcggcatcacccaaccctaggg 2500
Query: 121 ttgggtgagccgcggggggctaataataattgaccctctaatgttttatgtaaaccatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2499 ttgggtgagccgcggggggctaataataattgaccctctaatgttttatgtaaaccatgt 2440
Query: 181 tttataatgataatactagaaaatcacattacaaaatcaatatattttctagtatataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2439 tttataatgataatactagaaaatcacattacaaaatcaatatattttctagtatataat 2380
Query: 241 ccactatttaacatagttggaaatacttgataatataatctatcagtactagaaatttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2379 ccactatttaacatagttggaaatacttgataatataatctatcagtactagaaatttaa 2320
Query: 301 aatctatatttattactatcttccccgcggactcctcccctttaaagggattaccagggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2319 aatctatatttattactatcttccccgcggactcctcccctttaaagggattaccagggg 2260
Query: 361 aggagccgcggggtttataaattttattagtagatttaggtaaatcatataataaactat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2259 aggagccgcggggtttataaattttattagtagatttaggtaaatcatataataaactat 2200
Query: 421 tatcaggagttcaatttaaaatagtatcttgaatagccttcattaaatcttccccgcggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2199 tatcaggagttcaatttaaaatagtatcttgaatagccttcattaaatcttccccgcggt 2140
Query: 481 ctccccccgaa--gaggagccgcgggtgaatttatatgtkgagatacttctaaacttatt 538
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2139 ctccccccgaagggaggagccgcgggtgaatttatatgttgagatacttctaaacttatt 2080
Query: 539 ttatagttattgtttatatttttagaaatagctaaatgaccttcagcttcgataaatcct 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2079 ttatagttattgtttatatttttagaaatagctaaatgaccttcagcttcgataaatcct 2020
Query: 599 acaatatattcaatattaattttagaaataatatcatcatattccccgcnsggctcgccc 658
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2019 acaatatattcaatattaattttagaaataatatcatcatattccccgcgcggctcgccc 1960
Query: 659 taccctacggtarggcgatgccgcgcgggggggartatkgtttgaagaattagtatttaa 718
|||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 1959 taccctacggtagggcgatgccgcgcgggggggagtatggtttgaagaattagtatttaa 1900
Query: 719 ttcttcatttaatttattacataattctaatttratatttt 759
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1899 ttcttcatttaatttattacataattctaatttaatatttt 1859
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6309
Number of Sequences: 1807
Number of extensions: 6309
Number of successful extensions: 208
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)